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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924475.1_cds_XP_016472821.1_65015
CDS Infomation

[gene=LOC107794804] [db_xref=GeneID:107794804] [protein=putative pentatricopeptide repeat-containing protein At3g23330] [protein_id=XP_016472821.1] [location=join(29230..29272,30812..30956,31040..31180,33716..34305,34894..35027,37072..37215,37300..37443)] [gbkey=CDS]
Sequence

ATGTCTTCAAGCAAGGTTTTCTACAGCTCATTAGACAAGTTGGGTCTCGCATTTGGGAGA
AGTTGTTCGCAAATGCAAAGTGCGTTTTTGCGAATTCGAGCTTGCATTTGCGATAAAGGG
CTGGGCAGGGCAATCTACACATTTGCGAAGAAATATTTGCAATCGCGGACAGTCTATTAC
CGCTTTTGGGGGCCTCGCAAATGCGAGTTTTTTGTCGCATTTTCCACTTATGTGGTCTGG
GGCACTGATCGCATTTGCGATAAGTATTTCACATTTGCGATGATCAAAATTATGAACAAG
AGTTCGCAAATTGTGATATATGCAGCTGGGGTAGTAAAGCACATGCTCTCAAAGCTACCC
TCAAGCATTCGTCCTAATCTGAACCTCCAGTTCCGGCGTGCCCTTGAACCTCATGGAGAT
ATACGACGTGCCCGTCAACTGTTCGATGAAATTCCCGAACCAGATATACGATCGTGGACG
CTCTTGATCACCGCATACACGAAGAGGGGTTGTCCAGAAGAAGCATTGAAAGTCTACGAC
GAATTGCGGCAAAGGAAAGTTCTTCCTGATCAGTTAGCACTGTTATCAGTAACCAAGGCT
TGTGCTACTTTGGGCAACCTTATAAAGGCAAAAGGGATTCATCAAGATGTAATTAGATAT
GGATATCACTCCGATTTGCTCCTTGGAAATGCATTGATTGACATGTATGGCAAGTGTAAA
TACATTCGAGGTGCAAAAGAGGTTTTTGATAATTTAAGTGCTAAAGATGTAATCTCTTGG
ACGTCTATGAGTTCGTGCTATGTTAACTGTAAACTTCCAAGAGAGGCGCTAAGGATATTC
CGTGAAATGGGGTTAAATAGGGTGAGCCCAAATCCTGTTACATTGTCTTCTATACTTCCT
GCCTGCTCGGATTTGAAAACCTGCAAGTACTCCAATAGAAACCATGGATTCAGAGTACAC
TCAAACCAGATACCTGCAAATGGAGAAAGGTACCAACGGCTGGTGGGAAAATTGATTTAC
CTATCTCATACACGGCCAGATATTGCCTATGCGGTCTCGCATTTGCGAGGAGTTGTTCGC
AAATGCAAAGTGCGTTTTTGCGAATTCGATCTTGCATTTGCGATAAAGGGCTGGGCAGGG
CAATCTACGCATTTGCGAAGAAATATTTGCAATCGGGGACAGTCTATTACACTTTTGGGG
CCTCGCAAATGCGAGATTTTTGTCGCATTTTCCACTTATGTGGTCTGGGGCACTGATCGC
ATTTGCGATAAGTATTTCACATTTGCGATGATCAAAATTGCTAACAAGAGTTCGCAAATT
GTGATACCTACAGCTGGGTAA

Peptide Sequence

PEP ID

XP_016472821.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Nicotiana tabacum]
Sequence

MSSSKVFYSSLDKLGLAFGRSCSQMQSAFLRIRACICDKGLGRAIYTFAKKYLQSRTVYY
RFWGPRKCEFFVAFSTYVVWGTDRICDKYFTFAMIKIMNKSSQIVIYAAGVVKHMLSKLP
SSIRPNLNLQFRRALEPHGDIRRARQLFDEIPEPDIRSWTLLITAYTKRGCPEEALKVYD
ELRQRKVLPDQLALLSVTKACATLGNLIKAKGIHQDVIRYGYHSDLLLGNALIDMYGKCK
YIRGAKEVFDNLSAKDVISWTSMSSCYVNCKLPREALRIFREMGLNRVSPNPVTLSSILP
ACSDLKTCKYSNRNHGFRVHSNQIPANGERYQRLVGKLIYLSHTRPDIAYAVSHLRGVVR
KCKVRFCEFDLAFAIKGWAGQSTHLRRNICNRGQSITLLGPRKCEIFVAFSTYVVWGTDR
ICDKYFTFAMIKIANKSSQIVIPTAG

Transcript Sequence

Gene sequence data has not been registered.